Workshop 2008 "Cultures of Seeing 3D and Beyond"

hosted by

Max Planck Institute for the History of Science, Berlin, June 11-15, 2008

organized by

Science Center, Tartu University Library, Tartu (Estonia)

INSERM ERM206 - TAGC, Marseille (France)

Max Planck Institute for the History of Science, Berlin (Germany)

Konrad Lorenz Institute for Evolution and Cognition Research, Altenberg (Austria)

 

Following a workshop recently held in Naples in May 2007 (cf. Brauckmann & Thieffry, BioEssays 29 (2007): 1059-61), this second meeting will focus on elaborated analyses of how the life sciences visualize and represent their objects of study. The imagery produced by current experimental or in silico research will be contrasted to former observational studies depicting organisms, embryos, cells, genetic factors, and molecules from around 1800 to the 21st century. We will address the issue how biological scientists mastered to manifest the dimensionalities living organisms exhibit when taking shape. To fully trace the (epistemic) steps of representing 3D specimen, the scientists will offer detailed information about their techniques, tricks and tools to visualize genes, cells, embryos and species, using images of distinct scales and dimensions. Besides clarifying the process of image construction, they will explicate what their images reveal, what is filtered out, and if so, why. Scholars will supply these information with historical case studies on the changing practices of visualization, encompassing the specificity of different biological disciplines, specific techniques, model organisms and styles of communication. Their task will be to delineate an epistemic archeology of spatial forms which occur naturally beyond the range of unaided vision, e.g., rotating embryos, differentiating cells and their components, the fine structure of organisms, or yet the branching of species in models of evolution.

The progressive development of fate maps from the 1850s onwards provides an interesting example of biologists' visual practices. Fate maps were developed to enable the projection of developmental specifications onto static embryonic images. These maps were part of a dynamic learning process, relying on the coordination of attentively watching eyes with hands drawing and moulding wax models. Furthermore, we will follow the apparition and change of meaning of graphical symbols, either depending on different theoretical perspectives, or simply enforced by technical constraints. For example, arrows are used to represent displacement or dimensional modification to translate Baer's observation how a two-dimensional plate coils to three-dimensional tubes. Similarly, the development of three dimensional organs such as drosophila wings and legs are projected onto two-dimensional cell tissues (imaginal discs). From a historical perspective, getting from 2D to 3D has been an enormous problem, and still is, even if developmental biologists now claim to have arrived at the 5th dimension by combining a 3-dimensional exploration across time with the characterization of gene expression patterns. Dimensionality treatment also appears to vary widely among the biological disciplines.

The recent development of systems biology revives the issue of the representation of complex, heterogeneous and dynamic data sets graphically, using 2D or 3D graph-based representations. As hinted during the Naples workshops, these abstract representations (once properly formalized) can be used as powerful computational models to address sophisticated biological questions (e.g. regarding the number, stability and robustness of cell differentiation pathways).

Finally, all these questions bearing to the spatial and temporal deployment of individual organisms can be transposed to population and evolutionary levels. In this respect, we want to portray the corresponding specific styles of visualization and clarify the modes of mapping mental images or concepts to material models.

During the workshop we will discuss the following issues (non exclusive list):

  • Does biological imagery show unique features when compared to other natural sciences?
  • How did shifts in the conception of cells or genes relate to different styles of imaging?
  • To what extent have imaging techniques themselves influenced, directed and modulated scientific observation and data analyses?
  • What is needed to redraw, reproduce a picture? Mere analogical rendering will not let us redraw,
  • or fabricate the image we have just observed.
  • What is the feeling, or idea to be inside a cell-space, or inside a molecular space?
  • What and how visual representations are utilized for scientific lectures, public talks, scientific articles, textbooks, mass media publications?

The workshop fulfills two main purposes, (1) it reconstructs some chapters of the visual biography of genes, cells, and embryos in the life sciences and related specialties (e.g., architecture), and (2) it traces the influence of specific issues, like dimensionality, scale and pattern on biological imagery from around 1800 to the 21st century. Finally, we want to initiate a practical collaboration on iconic images, which will be further explored during a summer school in Tartu (Estonia) in 2009.

 

Sabine Brauckmann . Christina Brandt . Denis Thieffry . Gerd B. Müller